STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALL_0610Conserved hypothetical protein. (421 aa)    
Predicted Functional Partners:
MALL_0450
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
    0.773
MALL_0124
Conserved hypothetical protein.
  
    0.707
MALL_0733
Metal cation transporter, zinc (Zn2+)-iron (Fe2+) permease (ZIP) family protein; Identified by match to protein family HMM PF02535.
 
     0.704
MALL_0123
Conserved hypothetical protein.
  
    0.686
MALL_0774
Phosphopantethiene--protein transferase domain protein; Identified by match to protein family HMM PF01648; match to protein family HMM TIGR00556; Belongs to the P-Pant transferase superfamily.
 
     0.673
MALL_0739
Conserved hypothetical protein.
  
     0.665
MALL_0116
Hypothetical protein; Identified by glimmer; putative.
  
     0.604
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
    0.576
MALL_0611
Conserved hypothetical protein.
       0.506
MALL_0718
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.468
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.