Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MALL_0641BNR/Asp-box repeat protein; Identified by match to protein family HMM PF02012. (511 aa)    
Predicted Functional Partners:
MALL_0642
Transporter, SSS family; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.854
MALL_0640
ROK family protein; Identified by match to protein family HMM PF00480.
 
   
 0.848
MALL_0639
Putative N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
 
   
 0.846
MALL_0638
Uncharacterized protein, YhcH/YjgK/YiaL family; Identified by match to protein family HMM PF04074; match to protein family HMM TIGR00022.
 
     0.825
nanE
N-acetylmannosamine-6-P epimerase family protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
     
 0.806
MALL_0378
F5/8 type C domain protein; Identified by match to protein family HMM PF00728; match to protein family HMM PF00754.
 
 0.754
MALL_0416
Identified by match to protein family HMM TIGR03548.
 
     0.686
MALL_0674
F5/8 type C domain protein; Identified by match to protein family HMM PF00754; match to protein family HMM PF07555.
 
 0.682
MALL_0675
F5/8 type C domain protein; Identified by match to protein family HMM PF00754; match to protein family HMM PF07555.
 
 0.681
MALL_0841
Hyaluronoglucosaminidase; Identified by match to protein family HMM PF07555.
 
 0.676
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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