Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| MALL_0178 | MALL_0560 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Hypothetical protein; Identified by glimmer; putative. | 0.744 |
| MALL_0178 | MALL_0562 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Conserved hypothetical protein. | 0.728 |
| MALL_0178 | MALL_0563 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Hypothetical protein; Identified by glimmer; putative. | 0.748 |
| MALL_0178 | MALL_0651 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Identified by match to protein family HMM TIGR02184. | 0.756 |
| MALL_0178 | MALL_0652 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Identified by match to protein family HMM TIGR02184. | 0.757 |
| MALL_0178 | MALL_0653 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Identified by match to protein family HMM TIGR02184. | 0.756 |
| MALL_0178 | MALL_0669 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Lipofamily protein. | 0.766 |
| MALL_0178 | MALL_0752 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Hypothetical protein; Identified by glimmer; putative. | 0.692 |
| MALL_0178 | MALL_0797 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Identified by match to protein family HMM TIGR02184. | 0.765 |
| MALL_0178 | MALL_0798 | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | Identified by match to protein family HMM TIGR02184. | 0.766 |
| MALL_0560 | MALL_0178 | Hypothetical protein; Identified by glimmer; putative. | High affinity transport system protein p37; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06646. | 0.744 |
| MALL_0560 | MALL_0562 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein. | 0.965 |
| MALL_0560 | MALL_0563 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.964 |
| MALL_0560 | MALL_0651 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM TIGR02184. | 0.789 |
| MALL_0560 | MALL_0652 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM TIGR02184. | 0.789 |
| MALL_0560 | MALL_0653 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM TIGR02184. | 0.790 |
| MALL_0560 | MALL_0669 | Hypothetical protein; Identified by glimmer; putative. | Lipofamily protein. | 0.792 |
| MALL_0560 | MALL_0752 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.775 |
| MALL_0560 | MALL_0797 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM TIGR02184. | 0.791 |
| MALL_0560 | MALL_0798 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM TIGR02184. | 0.791 |
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