Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
MALL_0728Hypothetical protein; Identified by glimmer; putative. (324 aa)    
Predicted Functional Partners:
MALL_0727
Hypothetical protein; Identified by glimmer; putative.
 
  
 0.921
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
    0.825
MALL_0729
Putative dephospho-CoA kinase.
 
    0.791
MALL_0730
5'-3' exonuclease, SAM domain protein; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739.
     
 0.784
MALL_0731
Putative DNA polymerase III DnaE; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.
     
 0.784
MALL_0411
Hypothetical protein; Identified by glimmer; putative.
 
     0.658
MALL_0540
Conserved hypothetical protein; Identified by match to protein family HMM PF04167.
  
     0.641
MALL_0204
Identified by match to protein family HMM PF00657.
 
     0.533
MALL_0367
Identified by match to protein family HMM PF00565.
  
     0.488
MALL_0660
Hypothetical protein; Identified by glimmer; putative.
  
     0.479
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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