STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALL_0752Hypothetical protein; Identified by glimmer; putative. (573 aa)    
Predicted Functional Partners:
MALL_0753
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.946
MALL_0751
Hypothetical protein; Identified by glimmer; putative.
       0.782
MALL_0754
Hypothetical protein; Identified by glimmer; putative.
       0.782
MALL_0560
Hypothetical protein; Identified by glimmer; putative.
  
     0.775
MALL_0562
Conserved hypothetical protein.
  
     0.774
MALL_0653
Identified by match to protein family HMM TIGR02184.
  
     0.773
MALL_0668
Lipofamily protein.
  
     0.773
MALL_0669
Lipofamily protein.
  
     0.773
MALL_0797
Identified by match to protein family HMM TIGR02184.
  
     0.773
MALL_0798
Identified by match to protein family HMM TIGR02184.
  
     0.773
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.