STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALL_0800Phosphate ABC transporter, substrate-binding family protein. (349 aa)    
Predicted Functional Partners:
pstA
Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528.
 
 
 0.999
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
 0.999
MALL_0803
Identified by match to protein family HMM PF01895.
 
  
 0.977
MALL_0228
Conserved hypothetical protein.
 
     0.763
MALL_0239
Conserved hypothetical protein.
  
     0.706
MALL_0368
Conserved hypothetical protein; Identified by match to protein family HMM PF03202; match to protein family HMM PF03305.
  
  
 0.653
MALL_0476
C4-dicarboxylate transporter/malic acid transport protein; Identified by match to protein family HMM PF03595.
  
     0.624
MALL_0532
Amino acid permease; Identified by match to protein family HMM PF00324.
 
  
 0.574
MALL_0367
Identified by match to protein family HMM PF00565.
  
     0.569
MALL_0681
Amino acid permease; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00324.
 
  
 0.558
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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