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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pstBPhosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (290 aa)    
Predicted Functional Partners:
MALL_0800
Phosphate ABC transporter, substrate-binding family protein.
 
 
 0.999
pstA
Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528.
 
 0.999
MALL_0803
Identified by match to protein family HMM PF01895.
 
  
 0.976
MALL_0011
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; Belongs to the ABC transporter superfamily.
 
     
0.900
MALL_0023
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
     
0.900
MALL_0216
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     
0.900
MALL_0231
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     
0.900
MALL_0516
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
   
0.765
MALL_0009
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    
 0.624
potA
ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
   
0.588
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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