STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALL_0809Conserved hypothetical protein; Identified by match to protein family HMM PF03235. (330 aa)    
Predicted Functional Partners:
MALL_0811
Conserved hypothetical protein.
       0.782
MALL_0810
Hypothetical protein; Identified by glimmer; putative.
       0.773
MALL_0007
Bacterial extracellular solute-binding protein, family 5.
  
     0.675
MALL_0812
Conserved domain protein.
       0.473
MALL_0457
Conserved hypothetical protein.
  
     0.437
MALL_0020
Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
  
     0.400
Your Current Organism:
Mycoplasma alligatoris
NCBI taxonomy Id: 747682
Other names: M. alligatoris A21JP2, Mycoplasma alligatoris A21JP2, Mycoplasma alligatoris ATCC 700619, Mycoplasma alligatoris str. A21JP2, Mycoplasma alligatoris strain A21JP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.