STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162MQ66Cyclin; Belongs to the cyclin family. (344 aa)    
Predicted Functional Partners:
A0A168HWR6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.926
A0A168KB69
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.926
A0A168GWZ6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.835
A0A168GX05
Uncharacterized protein.
   
 0.835
A0A163A1Y6
MIF4G domain-containing protein.
    
 0.786
A0A162Q1R7
Uncharacterized protein.
    
 0.778
A0A168GXG8
Uncharacterized protein.
    
 0.778
A0A168LB47
CID domain-containing protein.
   
 
 0.777
A0A168H382
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.769
A0A168HAB8
Protein kinase domain-containing protein.
    
 0.737
Your Current Organism:
Mucor circinelloides f. lusitanicus
NCBI taxonomy Id: 747725
Other names: M. circinelloides f. lusitanicus CBS 277.49, Mucor circinelloides f. lusitanicus CBS 277.49
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