A0A162TWN8 protein (Mucor circinelloides f. lusitanicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A162TWN8

Uncharacterized protein. (417 aa)

Predicted Functional Partners:

A0A168KGF3

0.899

A0A168NHP4

0.899

A0A168K143

0.884

A0A168JKL0

0.879

A0A162QLR9

0.877

A0A168HY66

0.659

LSM1

0.641

A0A162YYS8

0.639

A0A162QHQ4

0.629

A0A168JKK1

0.629

Your Current Organism:

Mucor circinelloides f. lusitanicus

NCBI taxonomy Id: 747725
Other names: M. circinelloides f. lusitanicus CBS 277.49, Mucor circinelloides f. lusitanicus CBS 277.49

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162QHQ4	A0A162QLR9	A0A162QHQ4	A0A162QLR9	Uncharacterized protein.	Uncharacterized protein.	0.864
A0A162QHQ4	A0A162TWN8	A0A162QHQ4	A0A162TWN8	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A162QHQ4	A0A162YYS8	A0A162QHQ4	A0A162YYS8	Uncharacterized protein.	PAT1 domain-containing protein.	0.927
A0A162QHQ4	A0A168HY66	A0A162QHQ4	A0A168HY66	Uncharacterized protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.864
A0A162QHQ4	A0A168K143	A0A162QHQ4	A0A168K143	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A162QHQ4	A0A168KGF3	A0A162QHQ4	A0A168KGF3	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.822
A0A162QHQ4	A0A168NHP4	A0A162QHQ4	A0A168NHP4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.822
A0A162QHQ4	LSM1	A0A162QHQ4	A0A168HEM3	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.842
A0A162QLR9	A0A162QHQ4	A0A162QLR9	A0A162QHQ4	Uncharacterized protein.	Uncharacterized protein.	0.864
A0A162QLR9	A0A162TWN8	A0A162QLR9	A0A162TWN8	Uncharacterized protein.	Uncharacterized protein.	0.877
A0A162QLR9	A0A162YYS8	A0A162QLR9	A0A162YYS8	Uncharacterized protein.	PAT1 domain-containing protein.	0.983
A0A162QLR9	A0A168JKK1	A0A162QLR9	A0A168JKK1	Uncharacterized protein.	DCP2 domain-containing protein.	0.963
A0A162QLR9	A0A168JKL0	A0A162QLR9	A0A168JKL0	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.998
A0A162QLR9	A0A168K143	A0A162QLR9	A0A168K143	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A162QLR9	A0A168KGF3	A0A162QLR9	A0A168KGF3	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.969
A0A162QLR9	A0A168NHP4	A0A162QLR9	A0A168NHP4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.969
A0A162QLR9	LSM1	A0A162QLR9	A0A168HEM3	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.865
A0A162TWN8	A0A162QHQ4	A0A162TWN8	A0A162QHQ4	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A162TWN8	A0A162QLR9	A0A162TWN8	A0A162QLR9	Uncharacterized protein.	Uncharacterized protein.	0.877
A0A162TWN8	A0A162YYS8	A0A162TWN8	A0A162YYS8	Uncharacterized protein.	PAT1 domain-containing protein.	0.639