STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A168GI05Methyltransf_25 domain-containing protein. (158 aa)    
Predicted Functional Partners:
A0A168GZI6
Uncharacterized protein.
   
  0.640
A0A168HU56
Uncharacterized protein.
   
 0.637
A0A162Z4W4
Uncharacterized protein.
   
 0.634
A0A168HHG4
Histone H3; Belongs to the histone H3 family.
   
 0.632
A0A168PNI3
Histone H3; Belongs to the histone H3 family.
   
 0.632
A0A168HVT6
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
    
  0.630
A0A168KJG4
Uncharacterized protein.
   
  0.628
A0A168JAJ7
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.626
A0A168LFW2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.626
A0A162QVP0
Uncharacterized protein.
   
  0.621
Your Current Organism:
Mucor circinelloides f. lusitanicus
NCBI taxonomy Id: 747725
Other names: M. circinelloides f. lusitanicus CBS 277.49, Mucor circinelloides f. lusitanicus CBS 277.49
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