A0A168GPM5 protein (Mucor circinelloides f. lusitanicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A168GPM5

Uncharacterized protein. (91 aa)

Predicted Functional Partners:

A0A168QD92

0.702

A0A168KDE9

0.671

NOP7

0.658

A0A162TSH6

0.613

A0A162RQF1

0.612

A0A168N5Y2

0.612

A0A162U2G8

0.593

A0A168K7E9

0.592

A0A168LSL6

0.592

A0A168INL0

0.591

Your Current Organism:

Mucor circinelloides f. lusitanicus

NCBI taxonomy Id: 747725
Other names: M. circinelloides f. lusitanicus CBS 277.49, Mucor circinelloides f. lusitanicus CBS 277.49

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162RQF1	A0A168GPM5	A0A162RQF1	A0A168GPM5	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A162RQF1	A0A168INL0	A0A162RQF1	A0A168INL0	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A162RQF1	A0A168K7E9	A0A162RQF1	A0A168K7E9	Uncharacterized protein.	Homeodomain-like DNA binding domain-containing transcription factor.	0.586
A0A162RQF1	A0A168LSL6	A0A162RQF1	A0A168LSL6	Uncharacterized protein.	Uncharacterized protein.	0.578
A0A162TSH6	A0A162U2G8	A0A162TSH6	A0A162U2G8	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.593
A0A162TSH6	A0A168GPM5	A0A162TSH6	A0A168GPM5	Uncharacterized protein.	Uncharacterized protein.	0.613
A0A162TSH6	A0A168KDE9	A0A162TSH6	A0A168KDE9	Uncharacterized protein.	Ipi1_N domain-containing protein.	0.914
A0A162TSH6	A0A168N5Y2	A0A162TSH6	A0A168N5Y2	Uncharacterized protein.	CLP1_P domain-containing protein.	0.999
A0A162TSH6	A0A168QD92	A0A162TSH6	A0A168QD92	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A162TSH6	NOP7	A0A162TSH6	A0A168JNQ6	Uncharacterized protein.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.795
A0A162U2G8	A0A162TSH6	A0A162U2G8	A0A162TSH6	Ribosomal_L2_C domain-containing protein.	Uncharacterized protein.	0.593
A0A162U2G8	A0A168GPM5	A0A162U2G8	A0A168GPM5	Ribosomal_L2_C domain-containing protein.	Uncharacterized protein.	0.593
A0A162U2G8	A0A168K7E9	A0A162U2G8	A0A168K7E9	Ribosomal_L2_C domain-containing protein.	Homeodomain-like DNA binding domain-containing transcription factor.	0.419
A0A162U2G8	A0A168KDE9	A0A162U2G8	A0A168KDE9	Ribosomal_L2_C domain-containing protein.	Ipi1_N domain-containing protein.	0.782
A0A162U2G8	A0A168QD92	A0A162U2G8	A0A168QD92	Ribosomal_L2_C domain-containing protein.	Uncharacterized protein.	0.479
A0A162U2G8	NOP7	A0A162U2G8	A0A168JNQ6	Ribosomal_L2_C domain-containing protein.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.873
A0A168GPM5	A0A162RQF1	A0A168GPM5	A0A162RQF1	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A168GPM5	A0A162TSH6	A0A168GPM5	A0A162TSH6	Uncharacterized protein.	Uncharacterized protein.	0.613
A0A168GPM5	A0A162U2G8	A0A168GPM5	A0A162U2G8	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.593
A0A168GPM5	A0A168INL0	A0A168GPM5	A0A168INL0	Uncharacterized protein.	Uncharacterized protein.	0.591