STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ07938.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (288 aa)    
Predicted Functional Partners:
EFQ07939.1
Tat pathway signal sequence domain protein.
       0.712
EFQ07940.1
Hypothetical protein; KEGG: ago:AGOS_AGR029W 0.0080 AGR029Wp; K03019 DNA-directed RNA polymerase III subunit C11; Psort location: Cytoplasmic, score: 8.96.
       0.499
EFQ07941.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
       0.478
EFQ07942.1
Hypothetical protein.
       0.478
EFQ07943.1
Hypothetical protein.
       0.417
Your Current Organism:
Faecalibacterium prausnitzii KLE1255
NCBI taxonomy Id: 748224
Other names: F. cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii str. KLE1255, Faecalibacterium cf. prausnitzii strain KLE1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.