Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFQ07578.1 | EFQ07579.1 | HMPREF9436_00922 | HMPREF9436_00923 | Hypothetical protein. | Hypothetical protein. | 0.561 |
EFQ07578.1 | EFQ07581.1 | HMPREF9436_00922 | HMPREF9436_00925 | Hypothetical protein. | Hypothetical protein. | 0.434 |
EFQ07578.1 | deoB | HMPREF9436_00922 | HMPREF9436_00924 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.447 |
EFQ07579.1 | EFQ07578.1 | HMPREF9436_00923 | HMPREF9436_00922 | Hypothetical protein. | Hypothetical protein. | 0.561 |
EFQ07579.1 | EFQ07581.1 | HMPREF9436_00923 | HMPREF9436_00925 | Hypothetical protein. | Hypothetical protein. | 0.583 |
EFQ07579.1 | deoB | HMPREF9436_00923 | HMPREF9436_00924 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.603 |
EFQ07581.1 | EFQ07578.1 | HMPREF9436_00925 | HMPREF9436_00922 | Hypothetical protein. | Hypothetical protein. | 0.434 |
EFQ07581.1 | EFQ07579.1 | HMPREF9436_00925 | HMPREF9436_00923 | Hypothetical protein. | Hypothetical protein. | 0.583 |
EFQ07581.1 | deoB | HMPREF9436_00925 | HMPREF9436_00924 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.746 |
deoB | EFQ07578.1 | HMPREF9436_00924 | HMPREF9436_00922 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Hypothetical protein. | 0.447 |
deoB | EFQ07579.1 | HMPREF9436_00924 | HMPREF9436_00923 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Hypothetical protein. | 0.603 |
deoB | EFQ07581.1 | HMPREF9436_00924 | HMPREF9436_00925 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Hypothetical protein. | 0.746 |