STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapA-2Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (297 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.997
asd
KEGG: eel:EUBELI_01248 2.3e-136 aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.984
nifJ
KEGG: ere:EUBREC_1472 0. pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 
 0.898
EFQ05491.1
KEGG: ate:Athe_1959 6.2e-100 homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.879
EFQ07167.1
Putative diaminopimelate decarboxylase; KEGG: drm:Dred_3249 3.3e-160 Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
  
 0.821
eda
KEGG: cpy:Cphy_0054 1.4e-76 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; Psort location: Cytoplasmic, score: 9.26.
    
  0.715
EFQ06965.1
KEGG: ace:Acel_2012 2.4e-14 aspartate kinase K00928.
  
 
 0.701
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
 
 
 0.677
EFQ06537.1
Chorismate mutase; KEGG: ckl:CKL_0789 1.6e-48 pheA; hypothetical protein; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.654
EFQ05493.1
Aspartate kinase, monofunctional class; KEGG: csc:Csac_0991 1.8e-120 aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartokinase family.
 
 
 0.653
Your Current Organism:
Faecalibacterium prausnitzii KLE1255
NCBI taxonomy Id: 748224
Other names: F. cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii str. KLE1255, Faecalibacterium cf. prausnitzii strain KLE1255
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