STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ06042.1Stress responsive A/B barrel domain protein; KEGG: bbt:BBta_0455 8.5e-05 fructose-bisphosphate aldolase K01624. (100 aa)    
Predicted Functional Partners:
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.605
EFQ06041.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.563
EFQ06046.1
Hydrolase, TatD family; KEGG: bbe:BBR47_00870 1.9e-47 yabD; putative deoxyribonuclease K03424; Psort location: Cytoplasmic, score: 9.97.
       0.559
EFQ06039.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.555
EFQ06040.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.555
EFQ06045.1
Putative membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.526
EFQ06043.1
Hypothetical protein.
       0.522
EFQ07134.1
KEGG: llm:llmg_0970 2.2e-30 carboxymuconolactone decarboxylase family protein; K01607 4-carboxymuconolactone decarboxylase.
  
 
 0.516
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
    0.444
Your Current Organism:
Faecalibacterium prausnitzii KLE1255
NCBI taxonomy Id: 748224
Other names: F. cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii str. KLE1255, Faecalibacterium cf. prausnitzii strain KLE1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.