STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ06033.1Transcriptional regulator, GntR family; KEGG: msm:MSMEG_3400 3.8e-05 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; Psort location: Cytoplasmic, score: 8.96. (219 aa)    
Predicted Functional Partners:
EFQ07382.1
FCD domain protein; KEGG: msm:MSMEG_3400 6.2e-06 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; Psort location: Cytoplasmic, score: 8.96.
  
     0.766
EFQ07381.1
Transcriptional regulator, GntR family; KEGG: msm:MSMEG_3400 4.3e-06 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; Psort location: Cytoplasmic, score: 8.96.
  
     0.756
EFQ07810.1
Transcriptional regulator, GntR family; KEGG: sew:SeSA_A0170 8.2e-22 pdhR; transcriptional regulator PdhR K05799; Psort location: Cytoplasmic, score: 8.96.
  
     0.559
EFQ06034.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.554
EFQ06035.1
Transcriptional regulator, Fur family; KEGG: sbc:SbBS512_E4551 2.1e-05 zur; zinc uptake transcriptional repressor K09823; Psort location: Cytoplasmic, score: 8.96; Belongs to the Fur family.
       0.487
Your Current Organism:
Faecalibacterium prausnitzii KLE1255
NCBI taxonomy Id: 748224
Other names: F. cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii str. KLE1255, Faecalibacterium cf. prausnitzii strain KLE1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.