STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ05967.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (183 aa)    
Predicted Functional Partners:
EFQ05968.1
3H domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.532
EFQ05545.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
  
     0.523
EFQ06842.1
Efflux ABC transporter, permease protein; KEGG: dme:Dmel_CG12047 0.00015 mud; mushroom body defect; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.490
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.446
EFQ07507.1
Putative septum site-determining protein MinC; KEGG: abn:AB57_0618 4.4e-62 macrolide export ATP-binding/permease protein MacB K05685:K05686; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.416
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.412
Your Current Organism:
Faecalibacterium prausnitzii KLE1255
NCBI taxonomy Id: 748224
Other names: F. cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii KLE1255, Faecalibacterium cf. prausnitzii str. KLE1255, Faecalibacterium cf. prausnitzii strain KLE1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.