STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZKH_0704Zn-dependent peptidase; Belongs to the peptidase M16 family. (484 aa)    
Predicted Functional Partners:
AZKH_0703
Putative zinc protease.
  
0.994
petC
Cytochrome c1 subunit of cytochrome bc1.
   
 0.979
hoxF
Hydrogen dehydrogenase, alpha subunit.
   
 
 0.975
fdhB-2
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 
 0.975
AZKH_2623
FAD dependent oxidoreductase family protein.
   
 0.947
petA
Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.943
fdx-2
Ferredoxin protein.
  
 
 0.929
coxB
Cytochrome c oxidase, subunit II.
  
 0.913
petB
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.891
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.890
Your Current Organism:
Azoarcus sp. KH32C
NCBI taxonomy Id: 748247
Other names: A. sp. KH32C
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