Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hemNaOxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (463 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 
 0.962
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
    
 0.939
AZKH_3852
Hypothetical protein.
    
 0.920
ompW
Outer membrane protein W.
 
  
 0.895
ccoN
Cytochrome-cbb3 oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.868
ccoO
Cytochrome-cbb3 oxidase subunit II.
 
  
 0.841
fnr
Transcription factor.
 
  
 0.816
rdxA
Putative 4Fe-4S ferredoxin transmembrane protein.
 
  
 0.786
AZKH_0401
Hypothetical protein.
   
  
 0.785
fdx-12
4Fe-4S ferredoxin transmembrane protein.
 
  
 0.785
Your Current Organism:
Azoarcus sp. KH32C
NCBI taxonomy Id: 748247
Other names: A. sp. KH32C
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