Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fnrTranscription factor. (247 aa)    
Predicted Functional Partners:
hemNa
Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.816
AZKH_0838
Putative serine/threonine protein kinase.
  
 0.620
AZKH_4096
Putative serine/threonine protein kinase.
  
 0.620
AZKH_1813
Hypothetical protein.
  
 0.608
dnrD
Transcriptional regulator.
  
     0.604
AZKH_0006
Putative inosine-5'-monophosphate dehydrogenase related protein.
  
 0.602
AZKH_3123
Hypothetical protein.
  
 0.602
dnrE
Transcriptional regulator Dnr-type.
  
     0.591
AZKH_1116
Putative phosphoprotein phosphatase.
   
  0.586
AZKH_2184
Putative phosphoprotein phosphatase.
   
  0.586
Your Current Organism:
Azoarcus sp. KH32C
NCBI taxonomy Id: 748247
Other names: A. sp. KH32C
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