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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0010Hypothetical protein. (97 aa)    
Predicted Functional Partners:
NH8B_0011
DNA cytosine methylase; K00558.
       0.773
NH8B_0634
5,10-methylenetetrahydrofolate reductase; K00297; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.628
NH8B_2215
5,10-methylenetetrahydrofolate reductase; K00297; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.628
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
  
 0.556
NH8B_3059
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
   
  
 0.462
NH8B_0012
Hypothetical protein.
       0.445
NH8B_3058
ABC transporter, permease protein.
   
  
 0.412
NH8B_0055
Cystathionine gamma-lyase; K01758.
  
  
 0.403
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
  
 0.403
NH8B_3570
Cystathionine gamma-synthase; K01739.
  
  
 0.403
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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