STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0074Sigma54 specific transcriptional regulator, Fis family. (349 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase, sigma-54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.846
NH8B_0073
Protein of unknown function; DUF45.
       0.572
NH8B_3977
Multi-sensor hybrid histidine kinase.
     
 0.497
NH8B_2222
Diguanylate cyclase/phosphodiesterase with PAS and GAF sensor(s).
     
 0.462
NH8B_3609
Multi-sensor hybrid histidine kinase.
     
 0.445
NH8B_3206
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS sensor(s).
     
 0.418
NH8B_4100
Multi-sensor hybrid histidine kinase.
 
   
 0.407
NH8B_4073
Diguanylate cyclase with PAS sensor.
     
 0.404
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.