STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0111Hypothetical protein. (265 aa)    
Predicted Functional Partners:
NH8B_0112
ATP-dependent protease, putative.
 
     0.886
NH8B_0110
Two component transcriptional regulator.
  
  
 0.546
NH8B_1881
Cold-shock DNA-binding domain protein.
  
  
 0.479
tctE
Integral membrane sensor signal transduction histidine kinase; K07649.
     
 0.474
NH8B_3624
O6-methylguanine-DNA methyltransferase/Ada regulatory protein; K10778.
  
    0.427
NH8B_2449
Thymidine phosphorylase; K00758.
   
    0.426
NH8B_0113
KHG/KDPG aldolase; K01625.
     
 0.423
NH8B_0674
methylated-DNA/protein-cysteine methyltransferase; K00567.
  
    0.423
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
       0.412
NH8B_3330
Sigma 54 modulation protein/S30EA ribosomal protein.
   
  
 0.410
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.