STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0127Hypothetical protein. (131 aa)    
Predicted Functional Partners:
NH8B_0126
Putative peptidase, C39 family.
 
     0.952
NH8B_1814
Hypothetical protein.
  
     0.774
NH8B_0737
Dicarboxylate transport protein YdbH/DctA.
  
     0.573
NH8B_4109
Hypothetical protein.
  
     0.560
NH8B_2396
Hypothetical protein.
  
     0.461
NH8B_0128
Porin LamB type.
       0.443
NH8B_2362
Hypothetical protein.
  
     0.439
NH8B_1498
Hypothetical protein.
  
     0.422
NH8B_1115
Type VI secretion-associated protein.
  
     0.418
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.