STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0212phytanoyl-CoA dioxygenase family protein. (270 aa)    
Predicted Functional Partners:
NH8B_1631
Conserved hypothetical protein, Lin0512 family.
  
     0.707
NH8B_0211
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.701
NH8B_1630
Conserved hypothetical protein, Lin0512 family.
  
     0.698
NH8B_2548
Protein of unknown function; DUF1185.
  
     0.537
NH8B_2722
Amino acid adenylation domain protein.
  
  
 0.493
NH8B_2545
Luciferase-like monooxygenase.
  
     0.468
NH8B_2485
MmgE/PrpD family protein.
  
     0.451
NH8B_0036
Protein of unknown function; DUF849.
  
     0.448
NH8B_0887
Metal-dependent protein of the double-stranded beta helix superfamily-like protein.
  
     0.446
NH8B_0699
Cupin 2 protein.
 
   
 0.437
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.