STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0215Protein of unknown function; DUF1987. (173 aa)    
Predicted Functional Partners:
NH8B_0123
Hypothetical protein.
 
 
 0.980
NH8B_2030
GGDEF domain protein.
 
   0.833
NH8B_0122
Serine/threonine protein kinase.
 
    0.770
NH8B_0124
Protein of unknown function; DUF1987.
 
     0.758
NH8B_1230
Porin Gram-negative type.
  
     0.682
NH8B_4094
Porin Gram-negative type.
  
     0.670
NH8B_2533
Porin Gram-negative type.
  
     0.654
NH8B_0216
Protein of unknown function; DUF3422.
 
     0.638
NH8B_0016
Hypothetical protein.
  
     0.635
NH8B_1385
ComEA-like protein.
  
     0.614
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.