STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0331O-antigen polymerase. (593 aa)    
Predicted Functional Partners:
wzx
Polysaccharide biosynthesis protein/O-antigen translocase.
 
  
 0.794
NH8B_1156
Protein of unknown function; UPF0149.
  
     0.769
NH8B_2302
Hypothetical protein.
  
     0.769
NH8B_0433
Protein of unknown function; DUF469.
  
     0.766
NH8B_2783
Hypothetical protein.
  
     0.760
NH8B_3326
Protein of unknown function; DUF1239.
  
   
 0.760
NH8B_1176
Hypothetical protein.
  
   
 0.758
NH8B_0683
Hypothetical protein.
  
     0.757
NH8B_2629
Hypothetical protein.
  
     0.756
NH8B_3794
ATP synthase I chain.
  
     0.754
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.