STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0761Protein of unknown function; DUF156. (102 aa)    
Predicted Functional Partners:
NH8B_1367
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase.
  
  
 0.834
NH8B_1088
Heavy metal translocating P-type ATPase; K01533.
 
  
 0.740
NH8B_1368
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.702
NH8B_0763
Heavy-metal-associated domain protein.
  
  
 0.694
NH8B_0760
Multicopper oxidase type 3.
     
 0.676
NH8B_0762
Hypothetical protein.
       0.508
fliA
Flagellar biosynthesis sigma factor FliA.
    
   0.503
fliA-2
Flagellar biosynthesis sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
    
   0.503
NH8B_0245
Heavy metal translocating P-type ATPase; K01533.
 
  
 0.478
NH8B_2285
Heavy metal translocating P-type ATPase; K01533.
 
  
 0.455
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.