STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_0863Protein of unknown function; DUF2063. (258 aa)    
Predicted Functional Partners:
NH8B_0864
Protein of unknown function; DUF692; Belongs to the UPF0276 family.
  
 0.996
NH8B_0862
DoxX family protein.
 
  
 0.975
NH8B_0865
Transmembrane protein of unknown function; DUF2882.
 
  
 0.970
NH8B_0084
DoxX family protein.
  
  
 0.558
NH8B_2405
DoxX family protein.
  
  
 0.558
NH8B_3653
DoxX family protein.
  
  
 0.558
NH8B_0861
Phosphoserine phosphatase SerB; K01079.
       0.471
NH8B_0860
Hypothetical protein.
       0.463
NH8B_2027
Putative transmembrane anti-sigma factor.
 
   
 0.458
pilX
Type IV pilus assembly protein PilX.
  
     0.453
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.