STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumAFumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (508 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.997
NH8B_1009
Succinate dehydrogenase and fumarate reductase iron-sulfur protein; K00240; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.993
NH8B_1008
Succinate dehydrogenase, flavoprotein subunit; K00239; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.991
NH8B_1007
Succinate dehydrogenase, hydrophobic membrane anchor protein; K00242.
  
 
 0.988
NH8B_1006
Succinate dehydrogenase, cytochrome b556 subunit; K00241.
  
 
 0.984
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.983
NH8B_1011
Type II citrate synthase; K01647; Belongs to the citrate synthase family.
  
 
 0.976
NH8B_3049
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); Phosphate acetyltransferase, K00029.
 
 
 0.976
NH8B_0679
Isocitrate dehydrogenase, NADP-dependent; K00031.
  
  
 0.972
NH8B_0020
Malate dehydrogenase; K00029.
  
 
 0.953
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.