STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_1107Extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family. (255 aa)    
Predicted Functional Partners:
NH8B_3113
Polar amino acid ABC transporter, inner membrane subunit.
  0.959
NH8B_3114
Polar amino acid ABC transporter, inner membrane subunit.
 
  0.954
hisP-2
Amino acid ABC transporter, ATP-binding protein; K10017.
 
 
  0.949
NH8B_3571
Polar amino acid ABC transporter, permease protein.
 
 0.901
NH8B_2227
Polar amino acid ABC transporter, permease protein.
 
 0.878
NH8B_2138
Polar amino acid ABC transporter, permease protein.
   0.834
NH8B_4080
Polar amino acid ABC transporter, permease protein.
   0.820
NH8B_3750
Polar amino acid ABC transporter, permease protein.
    0.811
NH8B_4011
Polar amino acid ABC transporter, permease protein.
 
 0.805
NH8B_3751
Polar amino acid ABC transporter, permease protein.
   0.792
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.