STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpVType VI secretion ATPase, ClpV1 family; Belongs to the ClpA/ClpB family. (875 aa)    
Predicted Functional Partners:
impC
Type VI secretion protein EvpB/ImpC.
 
 
 0.956
impH
Type VI secretion protein ImpH.
 
  
 0.938
impA
ImpA-like N-terminal family protein.
 
  
 0.938
impG
Type VI secretion protein ImpG.
 
  
 0.932
NH8B_1133
PAAR motif-containing protein.
 
   
 0.931
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.914
NH8B_2136
Heat-shock protein Hsp70.
  
 
 0.908
hscA
Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
  
 
 0.908
vgrG-2
Type VI secretion system, Vgr family protein.
 
  
 0.903
dotU
Type IV/VI secretion system protein, DotU family.
 
  
 0.892
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.