STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_1341Creatinase; K08688. (403 aa)    
Predicted Functional Partners:
NH8B_1346
Sarcosine oxidase, alpha subunit; K00302; Belongs to the GcvT family.
 
 0.982
NH8B_1344
Sarcosine oxidase, beta subunit; K00303.
 
 
  0.975
NH8B_1347
Sarcosine oxidase, gamma subunit; K00305.
 
  
  0.975
NH8B_1345
Sarcosine oxidase, delta subunit; K00304.
 
  
  0.972
soxA
Sarcosine oxidase, alpha subunit; K00302; Belongs to the GcvT family.
 
 0.960
soxB
Sarcosine oxidase, beta subunit; K00303.
 
 
  0.944
soxD
Sarcosine oxidase, delta subunit; K00304.
  
  
  0.943
NH8B_1352
Creatininase; K01470.
 
  
  0.927
soxG
Sarcosine oxidase, gamma subunit; K00305.
  
  
  0.911
NH8B_1340
Transcriptional regulator, AraC family.
 
     0.598
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.