STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_1478Aromatic-amino-acid transaminase; K00832. (402 aa)    
Predicted Functional Partners:
NH8B_0637
Phenylalanine 4-monooxygenase; K00500.
  
 
 0.949
pheA1
Chorismate mutase/prephenate dehydratase; K04093 K04518.
    
 0.946
NH8B_0638
4-hydroxyphenylpyruvate dioxygenase; K00457.
  
 
 0.945
NH8B_2536
4-hydroxyphenylpyruvate dioxygenase; K00457.
  
 
 0.945
NH8B_2501
4-hydroxyphenylpyruvate dioxygenase; K00457.
  
 
 0.944
NH8B_3231
Prephenate dehydrogenase; K00210.
    
 0.926
NH8B_0054
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.920
NH8B_1101
malate/L-lactate dehydrogenase; K00016; Belongs to the LDH2/MDH2 oxidoreductase family.
     
 0.918
hisC
Histidinol-phosphate aminotransferase; K00817; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.911
hisC-2
Histidinol-phosphate aminotransferase; K00817; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.911
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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