STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_1646Hypothetical protein. (215 aa)    
Predicted Functional Partners:
NH8B_1647
Hypothetical protein.
 
     0.950
NH8B_1645
DNA transposition protein.
 
     0.947
NH8B_1651
Protein of unknown function; DUF3164.
 
     0.926
NH8B_1644
Phage transposase.
 
    0.921
NH8B_1643
Hypothetical protein.
 
     0.897
NH8B_1642
Putative transcriptional regulator, Nlp.
 
    0.873
NH8B_1653
Protein of unknown function; DUF1018.
 
     0.851
NH8B_1663
Mu-like prophage FluMu protein gp29.
 
     0.803
NH8B_1654
Mor transcription activator domain protein.
 
  
 0.802
NH8B_2076
DNA transposition protein.
 
     0.794
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.