STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_1767Tail sheath protein. (762 aa)    
Predicted Functional Partners:
NH8B_1768
Phage tail protein.
 
 
 0.977
NH8B_1781
GPW/gp25 family protein.
 
   0.965
NH8B_1778
Hypothetical protein.
 
 
 0.959
NH8B_1782
Putative phage tail region protein.
 
 
 0.957
NH8B_1777
Hypothetical protein.
 
 
 0.933
NH8B_1769
Hypothetical protein.
 
     0.887
NH8B_0545
Phage late control gene D protein GpD.
  
 
 0.883
NH8B_0550
Phage major tail tube protein.
  
 
 0.862
NH8B_0542
Phage tail protein I.
  
 
 0.854
NH8B_1775
Hypothetical protein.
 
 
   0.841
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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