STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_1925Glycosyl transferase, family 2. (422 aa)    
Predicted Functional Partners:
NH8B_1926
Polysaccharide deacetylase.
 
  
 0.988
NH8B_2791
Polysaccharide deacetylase.
 
  
 0.908
NH8B_0881
TPR domain/sulfotransferase domain protein.
  
 
 0.838
NH8B_0476
TPR repeat-containing protein.
  
 
 0.808
NH8B_3438
TPR repeat-containing protein.
  
 
 0.808
NH8B_1352
Creatininase; K01470.
  
  
 0.769
NH8B_1924
Hypothetical protein.
       0.736
NH8B_1257
Polysaccharide deacetylase.
 
  
 0.731
NH8B_2222
Diguanylate cyclase/phosphodiesterase with PAS and GAF sensor(s).
  
  
 0.694
NH8B_0100
Diguanylate cyclase with PAS sensor.
 
  
 0.677
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.