Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NH8B_2001Quinone oxidoreductase; K00344. (326 aa)    
Predicted Functional Partners:
NH8B_2263
AMP-dependent synthetase and ligase.
  
 0.874
NH8B_2000
Taurine dioxygenase; K03119.
 
     0.793
NH8B_2722
Amino acid adenylation domain protein.
  
 
 0.773
NH8B_2002
UspA domain protein.
       0.651
NH8B_1999
Protein of unknown function; DUF849.
 
     0.644
NH8B_2716
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
    
   0.602
rlmF
Putative SAM-dependent methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
   
 
  0.575
NH8B_2003
Rieske (2Fe-2S) domain protein.
       0.558
NH8B_2009
AMP-dependent synthetase and ligase.
  
 0.549
NH8B_2164
acyl-CoA synthetase.
  
 0.549
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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