STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2002UspA domain protein. (348 aa)    
Predicted Functional Partners:
NH8B_2003
Rieske (2Fe-2S) domain protein.
 
     0.708
NH8B_2001
Quinone oxidoreductase; K00344.
       0.651
NH8B_2000
Taurine dioxygenase; K03119.
       0.630
NH8B_1999
Protein of unknown function; DUF849.
 
     0.609
NH8B_2004
LuxR family transcriptional regulator.
 
     0.605
NH8B_1998
Major facilitator superfamily transporter.
 
     0.596
NH8B_0674
methylated-DNA/protein-cysteine methyltransferase; K00567.
  
    0.536
NH8B_3624
O6-methylguanine-DNA methyltransferase/Ada regulatory protein; K10778.
  
    0.531
NH8B_3977
Multi-sensor hybrid histidine kinase.
  
  
 0.484
NH8B_3991
Integral membrane sensor signal transduction histidine kinase.
 
   
 0.459
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.