STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2002UspA domain protein. (348 aa)    
Predicted Functional Partners:
NH8B_2003
Rieske (2Fe-2S) domain protein.
 
     0.709
NH8B_2001
Quinone oxidoreductase; K00344.
       0.651
NH8B_2000
Taurine dioxygenase; K03119.
       0.630
NH8B_1999
Protein of unknown function; DUF849.
 
     0.610
NH8B_2004
LuxR family transcriptional regulator.
 
     0.605
NH8B_1998
Major facilitator superfamily transporter.
 
     0.597
NH8B_0674
methylated-DNA/protein-cysteine methyltransferase; K00567.
  
    0.539
NH8B_3624
O6-methylguanine-DNA methyltransferase/Ada regulatory protein; K10778.
  
    0.536
NH8B_3991
Integral membrane sensor signal transduction histidine kinase.
 
   
 0.462
NH8B_1997
Protein of unknown function; DUF1234.
 
     0.454
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.