STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2003Rieske (2Fe-2S) domain protein. (102 aa)    
Predicted Functional Partners:
nirB
Assimilatory nitrite reductase (NAD(P)H), large subunit; K00362; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.930
NH8B_0398
Oxidoreductase FAD/NAD(P)-binding domain protein.
    
 0.928
antB
Anthranilate 1,2-dioxygenase, small subunit; K05600.
  
 
 0.916
antA
Anthranilate 1,2-dioxygenase, large subunit; K05599.
    
 0.910
NH8B_1367
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase.
     
 0.900
NH8B_2966
Nitric oxide reductase FlRd-NAD(+) reductase.
  
 
 0.875
cobA-3
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
  
  
 0.805
NH8B_2727
PrpF protein.
     
  0.800
NH8B_2002
UspA domain protein.
 
     0.709
NH8B_0245
Heavy metal translocating P-type ATPase; K01533.
   
   0.639
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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