STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2004LuxR family transcriptional regulator. (874 aa)    
Predicted Functional Partners:
NH8B_1998
Major facilitator superfamily transporter.
 
     0.704
NH8B_1999
Protein of unknown function; DUF849.
 
     0.674
NH8B_2000
Taurine dioxygenase; K03119.
 
     0.642
NH8B_2002
UspA domain protein.
 
     0.605
NH8B_2013
Protein of unknown function; DUF1302.
 
    0.580
NH8B_2765
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.541
NH8B_3721
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.541
NH8B_1997
Protein of unknown function; DUF1234.
 
     0.457
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.