STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2124Formate dehydrogenase, alpha subunit; K00123. (273 aa)    
Predicted Functional Partners:
NH8B_2126
Formate dehydrogenase, gamma subunit; K00127.
 
 
 0.986
NH8B_2125
Formate dehydrogenase, beta subunit; K00124.
 
 
 0.981
NH8B_2071
Formate dehydrogenase, alpha subunit; K00123; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.976
NH8B_2069
Formate dehydrogenase, delta subunit; K00126.
 
 
 0.936
NH8B_1220
Formate dehydrogenase, beta subunit; K00124.
 
 
 0.918
NH8B_1475
Assimilatory nitrate reductase (NADH), alpha subunit; K00372; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
     0.911
nuoE
NADH dehydrogenase (ubiquinone), E subunit; K00334.
 
 
 0.885
nuoF
NADH dehydrogenase (ubiquinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
 
 0.878
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 0.788
NH8B_1841
Putative ferredoxin protein.
  
 
 0.752
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.