STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrB-2Cation/multidrug efflux transport protein AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)    
Predicted Functional Partners:
acrA-2
Cation/multidrug efflux system, membrane-fusion protein AcrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.966
NH8B_2150
Transcriptional regulator, TetR family.
 
   
 0.889
acrA
Efflux transporter, membrane fusion protein AcrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.851
NH8B_2149
Cation/multidrug efflux system, outer membrane channel TolC.
 
 0.737
mdtA
Multidrug efflux system subunit MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.545
acrA-4
Cation/multidrug efflux system, membrane-fusion protein AcrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.509
yajC
Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.490
acrA-3
Cation/multidrug efflux system, membrane-fusion protein AcrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.486
NH8B_0187
RND efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.464
hlyD
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.462
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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