STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2162DNA-binding response regulator. (249 aa)    
Predicted Functional Partners:
NH8B_3977
Multi-sensor hybrid histidine kinase.
 
 
 0.974
NH8B_2163
PAS sensor hybrid histidine kinase.
 
 
 0.973
NH8B_4100
Multi-sensor hybrid histidine kinase.
 
 
 0.871
NH8B_3936
PAS sensor signal transduction histidine kinase.
 
 
 0.849
NH8B_0045
Integral membrane sensor signal transduction histidine kinase; K07638.
 
 
 0.831
NH8B_2346
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
 
 0.823
qseC
Sensor protein QseC; K07645.
 
 
 0.813
tctE
Integral membrane sensor signal transduction histidine kinase; K07649.
 
 
 0.811
NH8B_3609
Multi-sensor hybrid histidine kinase.
 
 
0.805
NH8B_3862
PAS sensor signal transduction histidine kinase; K07636.
 
 
 0.799
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.