STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnA-4Glutamine synthetase, catalytic domain; K01915; Belongs to the glutamine synthetase family. (444 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase subunit alpha; K00265.
  
 
 0.980
carB
Carbamoyl-phosphate synthase, large subunit; K01955; Belongs to the CarB family.
  
 
 0.941
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.937
pduQ
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.931
carA
Carbamoyl-phosphate synthase, small subunit; K01956; Belongs to the CarA family.
  
 
 0.923
gltD
Glutamate synthase subunit beta; K00266.
  
 
 0.923
glsA
Glutaminase; K01425; Belongs to the glutaminase family.
    
 0.915
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.914
NH8B_3110
NAD-glutamate dehydrogenase; K00260.
     
 0.912
nirB
Assimilatory nitrite reductase (NAD(P)H), large subunit; K00362; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.909
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.