STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2367Peptidase A24A prepilin type IV. (174 aa)    
Predicted Functional Partners:
NH8B_2369
Flp pilus assembly protein CpaB.
 
  
 0.981
gspF
Type II secretion system F domain protein.
 
  
 0.955
NH8B_2366
Flp/Fap pilin component.
 
  
 0.952
NH8B_2375
Response regulator receiver protein.
 
  
 0.935
NH8B_2370
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.911
NH8B_2374
TadE family protein.
 
  
 0.892
NH8B_2365
Flp/Fap pilin component.
 
  
 0.886
NH8B_2372
Hypothetical protein.
 
  
 0.881
NH8B_2373
TadE family protein.
 
  
 0.880
NH8B_2368
AAA ATPase.
 
     0.867
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.