STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaI3-oxoacid CoA-transferase, A subunit; K01031. (227 aa)    
Predicted Functional Partners:
pcaJ
3-oxoacid CoA-transferase, B subunit; K01032.
 0.999
NH8B_2498
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.984
NH8B_2496
3-oxoadipate enol-lactonase; K01055.
  
 
 0.943
NH8B_2630
acetyl-CoA acetyltransferase; K00632; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.936
NH8B_1541
3-oxoadipate enol-lactonase; K01055.
  
 
 0.911
NH8B_2942
3-methylcrotonyl-CoA carboxylase alpha subunit; K01968.
  
  
 0.761
NH8B_2497
3-carboxy-cis,cis-muconate cycloisomerase; K01857.
 
  
 0.634
NH8B_2495
4-carboxymuconolactone decarboxylase; K01607.
  
  
 0.593
NH8B_2944
hydroxymethylglutaryl-CoA lyase; K01640.
 
  
 0.587
NH8B_2011
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase; K07516.
  
  
 0.578
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.