STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2533Porin Gram-negative type. (361 aa)    
Predicted Functional Partners:
NH8B_0016
Hypothetical protein.
  
     0.732
NH8B_1248
Phosphoesterase, PA-phosphatase related.
  
     0.685
NH8B_3952
VacJ family lipoprotein.
   
 
 0.683
NH8B_1250
Hypothetical protein.
  
     0.677
NH8B_3514
Porin Gram-negative type.
  
  
 
0.670
NH8B_0780
Protein of unknown function; DUF3108.
  
    0.669
NH8B_2589
Porin Gram-negative type.
  
  
 
0.663
NH8B_1230
Porin Gram-negative type.
  
  
 
0.656
NH8B_0215
Protein of unknown function; DUF1987.
  
     0.654
NH8B_1477
Porin Gram-negative type.
  
  
 
0.653
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.