STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2970Cation diffusion facilitator family transporter. (346 aa)    
Predicted Functional Partners:
NH8B_2969
Transcriptional regulator, ArsR family.
     
 0.825
NH8B_2971
Hypothetical protein.
       0.773
NH8B_2717
FAD dependent oxidoreductase.
  
    0.650
NH8B_2968
Sulphate transporter.
  
  
 0.637
NH8B_1088
Heavy metal translocating P-type ATPase; K01533.
  
  
 0.619
NH8B_2972
Citrate transporter.
     
 0.577
NH8B_1409
Redoxin domain protein.
    
 0.546
NH8B_0245
Heavy metal translocating P-type ATPase; K01533.
  
  
 0.530
NH8B_2057
Heavy metal translocating P-type ATPase.
  
  
 0.489
NH8B_2285
Heavy metal translocating P-type ATPase; K01533.
  
  
 0.489
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.